BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C01SP1|AL426484
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1393 1562 0.0
>3x_Contig1393
Length = 6980
Score = 1562 bits (788), Expect = 0.0
Identities = 816/820 (99%), Gaps = 4/820 (0%)
Strand = Plus / Plus
Query: 1 ggtcgcaggattaccaaaacaatgtgttaaatttcttgtatcgagagtcaagtgacggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4257 ggtcgcaggattaccaaaacaatgtgttaaatttcttgtatcgagagtcaagtgacggga 4316
Query: 61 gtgaattattggagaacaacagaatcacgtttgtgcaaactttgagtggtaccggtgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4317 gtgaattattggagaacaacagaatcacgtttgtgcaaactttgagtggtaccggtgcat 4376
Query: 121 tagctgtagcttcaaaactcttggcaacgtttgtgtcgaaaaccgtatggataccaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4377 tagctgtagcttcaaaactcttggcaacgtttgtgtcgaaaaccgtatggataccaaatc 4436
Query: 181 catcttgggctaatcattcgaacgttttccaatggaacggattcaatcagatcaaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4437 catcttgggctaatcattcgaacgttttccaatggaacggattcaatcagatcaaatatt 4496
Query: 241 atacgtactacgaggatgggaaattgagtatcgataaatggctcaaggaactcaaggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4497 atacgtactacgaggatgggaaattgagtatcgataaatggctcaaggaactcaaggaga 4556
Query: 301 gttgtagttctagggaccccgactggccccccttctatagtgttacacgcttgctgtcat 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4557 gttgtagttctagggaccccgactggcccccct-ctatagtgttacacgcttgctgtcat 4615
Query: 361 aattccaatcaggagtgtgaccctacgttggaacaatggcaacagatattgccagtgatc 420
||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4616 aat-ccaa-caggagtg-gaccctacgttggaacaatggcaacagatattgccagtgatc 4672
Query: 421 catgatttaggaataactcccataatagacatggcgtaccaaggaatggaatcagggaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 catgatttaggaataactcccataatagacatggcgtaccaaggaatggaatcagggaac 4732
Query: 481 cttatacaggatgcttatctattaagaatgtgtctagaatacgaatggcccaacggtcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4733 cttatacaggatgcttatctattaagaatgtgtctagaatacgaatggcccaacggtcta 4792
Query: 541 tttgtgtgccaatcgtttgctaagaacatgggcttatacggtgaacgtgtaggttcgtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4793 tttgtgtgccaatcgtttgctaagaacatgggcttatacggtgaacgtgtaggttcgtta 4852
Query: 601 agtgtcgttgtcccaccaaatcccttggatctcaaatcaaccatcgactctcaactaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4853 agtgtcgttgtcccaccaaatcccttggatctcaaatcaaccatcgactctcaactaaag 4912
Query: 661 aagattgtaagaggtatatactcttctccaccgggatatgggtctcgtgtagcgaacttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4913 aagattgtaagaggtatatactcttctccaccgggatatgggtctcgtgtagcgaacttg 4972
Query: 721 gtgctaagcaatccaaaattgaagcagcaatggttcgtagacgttaagaatatgtctgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 gtgctaagcaatccaaaattgaagcagcaatggttcgtagacgttaagaatatgtctgat 5032
Query: 781 agactatggaacgttagaattcaaatgcatgagagattga 820
||||||||||||||||||||||||||||||||||||||||
Sbjct: 5033 agactatggaacgttagaattcaaatgcatgagagattga 5072
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4809
Number of Sequences: 1807
Number of extensions: 4809
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)